Detailed information of SNP:



SNP ID: sf1012681956(Gbrowse)

Chromosome: chr10

Position: 12681956
Major allele: T

Minor allele: A

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of A(minor allele)
All1385 99.06% 0.94%
All Indica799 100.00% 0.00%
All Japonica463 97.19% 2.81%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica307 95.77% 4.23%
Tropical Japonica89 100.00% 0.00%
Japonica Intermediate67 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1012681956 T->A INTERGENIC None