Detailed information of SNP:



SNP ID: sf1013032230(Gbrowse)

Chromosome: chr10

Position: 13032230
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 76.71% 23.29%
All Indica798 66.42% 33.58%
All Japonica496 89.11% 10.89%
Aus67 100.00% 0.00%
Indica I375 39.20% 60.80%
Indica II212 94.34% 5.66%
Indica Intermediate211 86.73% 13.27%
Temperate Japonica334 99.10% 0.90%
Tropical Japonica94 56.38% 43.62%
Japonica Intermediate68 85.29% 14.71%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1013032230 G->A INTERGENIC None