Detailed information of SNP:



SNP ID: sf1013204339(Gbrowse)

Chromosome: chr10

Position: 13204339
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1416 78.81% 21.19%
All Indica796 72.61% 27.39%
All Japonica497 99.60% 0.40%
Aus67 1.49% 98.51%
Indica I373 67.83% 32.17%
Indica II213 91.08% 8.92%
Indica Intermediate210 62.38% 37.62%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 71.43% 28.57%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1013204339 G->A INTERGENIC None