Detailed information of SNP:



SNP ID: sf1013262440(Gbrowse)

Chromosome: chr10

Position: 13262440
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1411 89.87% 10.13%
All Indica799 99.87% 0.13%
All Japonica489 71.78% 28.22%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica327 63.30% 36.70%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 75.00% 25.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1013262440 G->A INTERGENIC None