Detailed information of SNP:



SNP ID: sf1013462182(Gbrowse)

Chromosome: chr10

Position: 13462182
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 52.72% 47.28%
All Indica798 69.55% 30.45%
All Japonica497 18.91% 81.09%
Aus67 98.51% 1.49%
Indica I374 67.11% 32.89%
Indica II213 85.45% 14.55%
Indica Intermediate211 57.82% 42.18%
Temperate Japonica335 2.09% 97.91%
Tropical Japonica94 65.96% 34.04%
Japonica Intermediate68 36.76% 63.24%
Group VI/Aromatic14 28.57% 71.43%
Intermediate41 68.29% 31.71%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1013462182 G->A INTERGENIC None