Detailed information of SNP:
|
SNP ID:
sf1014414741(Gbrowse)
Chromosome: chr10 Position: 14414741 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1374 | 96.94% | 3.06% |
| All Indica | 755 | 94.70% | 5.30% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 346 | 89.31% | 10.69% |
| Indica II | 204 | 99.51% | 0.49% |
| Indica Intermediate | 205 | 99.02% | 0.98% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1014414741 | G->A | INTERGENIC | None |