Detailed information of SNP:



SNP ID: sf1014979891(Gbrowse)

Chromosome: chr10

Position: 14979891
Major allele: C

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 64.74% 35.26%
All Indica799 99.25% 0.75%
All Japonica497 3.22% 96.78%
Aus67 100.00% 0.00%
Indica I375 99.47% 0.53%
Indica II213 99.53% 0.47%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 1.19% 98.81%
Tropical Japonica94 7.45% 92.55%
Japonica Intermediate68 7.35% 92.65%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 68.29% 31.71%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1014979891 T->C INTERGENIC None