Detailed information of SNP:



SNP ID: sf1015132526(Gbrowse)

Chromosome: chr10

Position: 15132526
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1415 96.89% 3.11%
All Indica795 94.59% 5.41%
All Japonica497 100.00% 0.00%
Aus67 98.51% 1.49%
Indica I374 96.52% 3.48%
Indica II212 92.45% 7.55%
Indica Intermediate209 93.30% 6.70%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1015132526 C->T INTERGENIC None