Detailed information of SNP:



SNP ID: sf1015600636(Gbrowse)

Chromosome: chr10

Position: 15600636
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1326 95.02% 4.98%
All Indica797 100.00% 0.00%
All Japonica409 84.60% 15.40%
Aus67 98.51% 1.49%
Indica I375 100.00% 0.00%
Indica II212 100.00% 0.00%
Indica Intermediate210 100.00% 0.00%
Temperate Japonica304 97.70% 2.30%
Tropical Japonica61 26.23% 73.77%
Japonica Intermediate44 75.00% 25.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate39 94.87% 5.13%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1015600636 C->T INTERGENIC None