Detailed information of SNP:
|
SNP ID:
sf1015912153(Gbrowse)
Chromosome: chr10 Position: 15912153 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1408 | 97.16% | 2.84% |
| All Indica | 789 | 95.94% | 4.06% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 92.42% | 7.58% |
| Indica I | 371 | 99.19% | 0.81% |
| Indica II | 208 | 90.38% | 9.62% |
| Indica Intermediate | 210 | 95.71% | 4.29% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 85.71% | 14.29% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1015912153 | A->G | INTERGENIC | None |