Detailed information of SNP:



SNP ID: sf1016432267(Gbrowse)

Chromosome: chr10

Position: 16432267
Major allele: C

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 75.69% 24.31%
All Indica799 99.50% 0.50%
All Japonica497 33.80% 66.20%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 99.06% 0.94%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 33.13% 66.87%
Tropical Japonica94 9.57% 90.43%
Japonica Intermediate68 70.59% 29.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 71.43% 28.57%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1016432267 T->C INTERGENIC None