Detailed information of SNP:



SNP ID: sf1016557267(Gbrowse)

Chromosome: chr10

Position: 16557267
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1412 97.59% 2.41%
All Indica792 95.83% 4.17%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I374 99.47% 0.53%
Indica II210 88.10% 11.90%
Indica Intermediate208 97.12% 2.88%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1016557267 G->A INTERGENIC None