Detailed information of SNP:



SNP ID: sf1016866729(Gbrowse)

Chromosome: chr10

Position: 16866729
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 72.52% 27.48%
All Indica799 99.25% 0.75%
All Japonica497 24.75% 75.25%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 98.59% 1.41%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 1.19% 98.81%
Tropical Japonica94 91.49% 8.51%
Japonica Intermediate68 48.53% 51.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1016866729 G->A INTERGENIC None