Detailed information of SNP:



SNP ID: sf1017857796(Gbrowse)

Chromosome: chr10

Position: 17857796
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1406 95.80% 4.20%
All Indica799 100.00% 0.00%
All Japonica484 87.81% 12.19%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica325 83.08% 16.92%
Tropical Japonica93 100.00% 0.00%
Japonica Intermediate66 93.94% 6.06%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1017857796 G->A INTERGENIC None