Detailed information of SNP:
SNP ID:
sf1017914773(Gbrowse)
Chromosome: chr10 Position: 17914773 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1371 | 94.24% | 5.76% |
All Indica | 799 | 99.62% | 0.38% |
All Japonica | 450 | 83.33% | 16.67% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 99.20% | 0.80% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 289 | 75.78% | 24.22% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 67 | 92.54% | 7.46% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1017914773 | G->A | INTERGENIC | None |