Detailed information of SNP:
|
SNP ID:
sf1018933480(Gbrowse)
Chromosome: chr10 Position: 18933480 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 50.11% | 49.89% |
| All Indica | 797 | 21.58% | 78.42% |
| All Japonica | 497 | 86.92% | 13.08% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 2.13% | 97.87% |
| Indica II | 212 | 53.77% | 46.23% |
| Indica Intermediate | 210 | 23.81% | 76.19% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 94 | 43.62% | 56.38% |
| Japonica Intermediate | 68 | 89.71% | 10.29% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1018933480 | G->A | INTERGENIC | None |