Detailed information of SNP:



SNP ID: sf1019292478(Gbrowse)

Chromosome: chr10

Position: 19292478
Major allele: C

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 70.05% 29.95%
All Indica799 99.37% 0.63%
All Japonica497 17.10% 82.90%
Aus67 100.00% 0.00%
Indica I375 98.93% 1.07%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 2.69% 97.31%
Tropical Japonica94 68.09% 31.91%
Japonica Intermediate68 17.65% 82.35%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1019292478 T->C INTERGENIC None