Detailed information of SNP:
|
SNP ID:
sf1022073895(Gbrowse)
Chromosome: chr10 Position: 22073895 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 50.60% | 49.40% |
| All Indica | 798 | 86.22% | 13.78% |
| All Japonica | 497 | 0.60% | 99.40% |
| Aus | 67 | 7.46% | 92.54% |
| Indica I | 375 | 88.00% | 12.00% |
| Indica II | 212 | 81.60% | 18.40% |
| Indica Intermediate | 211 | 87.68% | 12.32% |
| Temperate Japonica | 335 | 0.60% | 99.40% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 1.47% | 98.53% |
| Group VI/Aromatic | 14 | 14.29% | 85.71% |
| Intermediate | 41 | 46.34% | 53.66% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1022073895 | A->G | INTERGENIC | None |