Detailed information of SNP:
|
SNP ID:
sf1022743233(Gbrowse)
Chromosome: chr10 Position: 22743233 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1322 | 97.88% | 2.12% |
| All Indica | 702 | 96.15% | 3.85% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 324 | 95.37% | 4.63% |
| Indica II | 182 | 96.70% | 3.30% |
| Indica Intermediate | 196 | 96.94% | 3.06% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1022743233 | G->A | INTERGENIC | None |