Detailed information of SNP:
|
SNP ID:
sf1022775695(Gbrowse)
Chromosome: chr10 Position: 22775695 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1415 | 84.66% | 15.34% |
| All Indica | 798 | 81.08% | 18.92% |
| All Japonica | 494 | 87.65% | 12.35% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 63.90% | 36.10% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 211 | 94.31% | 5.69% |
| Temperate Japonica | 334 | 90.42% | 9.58% |
| Tropical Japonica | 92 | 69.57% | 30.43% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1022775695 | A->G | INTERGENIC | None |