Detailed information of SNP:
|
SNP ID:
sf1022940614(Gbrowse)
Chromosome: chr10 Position: 22940614 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 86.09% | 13.91% |
| All Indica | 797 | 79.92% | 20.08% |
| All Japonica | 496 | 93.15% | 6.85% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 373 | 65.68% | 34.32% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 85.78% | 14.22% |
| Temperate Japonica | 335 | 96.42% | 3.58% |
| Tropical Japonica | 93 | 83.87% | 16.13% |
| Japonica Intermediate | 68 | 89.71% | 10.29% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1022940614 | G->A | INTERGENIC | None |