Detailed information of SNP:
|
SNP ID:
sf1023016341(Gbrowse)
Chromosome: chr10 Position: 23016341 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1394 | 59.33% | 40.67% |
| All Indica | 779 | 96.15% | 3.85% |
| All Japonica | 497 | 0.40% | 99.60% |
| Aus | 64 | 84.38% | 15.62% |
| Indica I | 368 | 96.20% | 3.80% |
| Indica II | 206 | 96.12% | 3.88% |
| Indica Intermediate | 205 | 96.10% | 3.90% |
| Temperate Japonica | 335 | 0.00% | 100.00% |
| Tropical Japonica | 94 | 2.13% | 97.87% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 40 | 52.50% | 47.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1023016341 | A->G | INTERGENIC | None |