Detailed information of SNP:



SNP ID: sf1103567204(Gbrowse)

Chromosome: chr11

Position: 3567204
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1414 84.58% 15.42%
All Indica796 78.14% 21.86%
All Japonica496 92.54% 7.46%
Aus66 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 38.97% 61.03%
Indica Intermediate208 79.33% 20.67%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 65.96% 34.04%
Japonica Intermediate67 97.01% 2.99%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1103567204 C->T INTERGENIC None