Detailed information of SNP:



SNP ID: sf1104059224(Gbrowse)

Chromosome: chr11

Position: 4059224
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 92.31% 7.69%
All Indica799 89.49% 10.51%
All Japonica497 100.00% 0.00%
Aus65 66.15% 33.85%
Indica I375 78.93% 21.07%
Indica II213 99.53% 0.47%
Indica Intermediate211 98.10% 1.90%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1104059224 G->A INTERGENIC None