Detailed information of SNP:



SNP ID: sf1105812149(Gbrowse)

Chromosome: chr11

Position: 5812149
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 94.42% 5.58%
All Indica799 100.00% 0.00%
All Japonica495 84.44% 15.56%
Aus67 98.51% 1.49%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica333 78.38% 21.62%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 94.12% 5.88%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1105812149 G->A INTERGENIC None