Detailed information of SNP:
|
SNP ID:
sf1107359577(Gbrowse)
Chromosome: chr11 Position: 7359577 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1386 | 97.76% | 2.24% |
| All Indica | 768 | 95.96% | 4.04% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 361 | 98.34% | 1.66% |
| Indica II | 208 | 94.71% | 5.29% |
| Indica Intermediate | 199 | 92.96% | 7.04% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1107359577 | G->A | INTERGENIC | None |