Detailed information of SNP:



SNP ID: sf1107495749(Gbrowse)

Chromosome: chr11

Position: 7495749
Major allele: C

Minor allele: G

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1191 97.06% 2.94%
All Indica788 99.87% 0.13%
All Japonica331 91.84% 8.16%
Aus23 78.26% 21.74%
Indica I372 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate203 100.00% 0.00%
Temperate Japonica227 89.87% 10.13%
Tropical Japonica55 98.18% 1.82%
Japonica Intermediate49 93.88% 6.12%
Group VI/Aromatic12 91.67% 8.33%
Intermediate37 97.30% 2.70%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1107495749 C->G INTERGENIC None