Detailed information of SNP:
SNP ID:
sf1107621922(Gbrowse)
Chromosome: chr11 Position: 7621922 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1419 | 92.32% | 7.68% |
All Indica | 799 | 99.25% | 0.75% |
All Japonica | 497 | 93.56% | 6.44% |
Aus | 67 | 20.90% | 79.10% |
Indica I | 375 | 98.67% | 1.33% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 99.53% | 0.47% |
Temperate Japonica | 335 | 92.84% | 7.16% |
Tropical Japonica | 94 | 94.68% | 5.32% |
Japonica Intermediate | 68 | 95.59% | 4.41% |
Group VI/Aromatic | 14 | 35.71% | 64.29% |
Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1107621922 | T->G | INTERGENIC | None |