Detailed information of SNP:



SNP ID: sf1107621922(Gbrowse)

Chromosome: chr11

Position: 7621922
Major allele: T

Minor allele: G

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1419 92.32% 7.68%
All Indica799 99.25% 0.75%
All Japonica497 93.56% 6.44%
Aus67 20.90% 79.10%
Indica I375 98.67% 1.33%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 92.84% 7.16%
Tropical Japonica94 94.68% 5.32%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 35.71% 64.29%
Intermediate42 78.57% 21.43%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1107621922 T->G INTERGENIC None