Detailed information of SNP:



SNP ID: sf1108381408(Gbrowse)

Chromosome: chr11

Position: 8381408
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 98.73% 1.27%
All Indica799 100.00% 0.00%
All Japonica496 96.77% 3.23%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 85.11% 14.89%
Japonica Intermediate67 97.01% 2.99%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1108381408 C->T INTERGENIC None