Detailed information of SNP:
|
SNP ID:
sf1108745610(Gbrowse)
Chromosome: chr11 Position: 8745610 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 95.35% | 4.65% |
| All Indica | 798 | 95.86% | 4.14% |
| All Japonica | 497 | 94.97% | 5.03% |
| Aus | 67 | 94.03% | 5.97% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 212 | 96.23% | 3.77% |
| Indica Intermediate | 211 | 97.63% | 2.37% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 77.66% | 22.34% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1108745610 | G->A | INTERGENIC | None |