Detailed information of SNP:
|
SNP ID:
sf1109995243(Gbrowse)
Chromosome: chr11 Position: 9995243 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 93.86% | 6.14% |
| All Indica | 797 | 94.35% | 5.65% |
| All Japonica | 497 | 93.76% | 6.24% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 95.45% | 4.55% |
| Indica II | 212 | 93.87% | 6.13% |
| Indica Intermediate | 211 | 92.89% | 7.11% |
| Temperate Japonica | 335 | 92.84% | 7.16% |
| Tropical Japonica | 94 | 95.74% | 4.26% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 64.29% | 35.71% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1109995243 | A->G | INTERGENIC | None |