Detailed information of SNP:
|
SNP ID:
sf1110007026(Gbrowse)
Chromosome: chr11 Position: 10007026 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1418 | 95.56% | 4.44% |
| All Indica | 798 | 97.62% | 2.38% |
| All Japonica | 497 | 94.16% | 5.84% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 374 | 95.99% | 4.01% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 99.05% | 0.95% |
| Temperate Japonica | 335 | 93.13% | 6.87% |
| Tropical Japonica | 94 | 96.81% | 3.19% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 64.29% | 35.71% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1110007026 | A->G | INTERGENIC | None |