Detailed information of SNP:
|
SNP ID:
sf1110481804(Gbrowse)
Chromosome: chr11 Position: 10481804 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1385 | 96.32% | 3.68% |
| All Indica | 770 | 93.77% | 6.23% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 63 | 98.41% | 1.59% |
| Indica I | 365 | 96.16% | 3.84% |
| Indica II | 201 | 91.04% | 8.96% |
| Indica Intermediate | 204 | 92.16% | 7.84% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1110481804 | G->A | INTERGENIC | None |