Detailed information of SNP:



SNP ID: sf1110511907(Gbrowse)

Chromosome: chr11

Position: 10511907
Major allele: T

Minor allele: C

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of C(minor allele)
All1392 82.90% 17.10%
All Indica777 74.90% 25.10%
All Japonica495 95.76% 4.24%
Aus64 81.25% 18.75%
Indica I364 69.23% 30.77%
Indica II207 83.57% 16.43%
Indica Intermediate206 76.21% 23.79%
Temperate Japonica333 95.50% 4.50%
Tropical Japonica94 95.74% 4.26%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 85.71% 14.29%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1110511907 T->C INTERGENIC None