Detailed information of SNP:
SNP ID:
sf1114753010(Gbrowse)
Chromosome: chr11 Position: 14753010 |
Major allele:
A
Minor allele: T Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1401 | 97.43% | 2.57% |
All Indica | 781 | 95.39% | 4.61% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 370 | 97.03% | 2.97% |
Indica II | 206 | 91.75% | 8.25% |
Indica Intermediate | 205 | 96.10% | 3.90% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1114753010 | A->T | INTERGENIC | None |