Detailed information of SNP:



SNP ID: sf1115035656(Gbrowse)

Chromosome: chr11

Position: 15035656
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1413 75.16% 24.84%
All Indica793 63.30% 36.70%
All Japonica497 98.99% 1.01%
Aus67 38.81% 61.19%
Indica I375 80.27% 19.73%
Indica II213 44.60% 55.40%
Indica Intermediate205 51.71% 48.29%
Temperate Japonica335 98.51% 1.49%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 69.05% 30.95%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1115035656 C->T INTERGENIC None