Detailed information of SNP:



SNP ID: sf1117087144(Gbrowse)

Chromosome: chr11

Position: 17087144
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1410 71.06% 28.94%
All Indica793 73.01% 26.99%
All Japonica496 78.83% 21.17%
Aus66 9.09% 90.91%
Indica I373 79.36% 20.64%
Indica II212 61.32% 38.68%
Indica Intermediate208 73.56% 26.44%
Temperate Japonica335 69.85% 30.15%
Tropical Japonica93 97.85% 2.15%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 35.71% 64.29%
Intermediate41 51.22% 48.78%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1117087144 A->G INTERGENIC None