Detailed information of SNP:
|
SNP ID:
sf1119045061(Gbrowse)
Chromosome: chr11 Position: 19045061 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1395 | 93.48% | 6.52% |
| All Indica | 786 | 93.77% | 6.23% |
| All Japonica | 489 | 97.34% | 2.66% |
| Aus | 64 | 60.94% | 39.06% |
| Indica I | 369 | 97.56% | 2.44% |
| Indica II | 207 | 89.86% | 10.14% |
| Indica Intermediate | 210 | 90.95% | 9.05% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 92 | 95.65% | 4.35% |
| Japonica Intermediate | 62 | 93.55% | 6.45% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1119045061 | G->A | INTERGENIC | None |