Detailed information of SNP:



SNP ID: sf1120906615(Gbrowse)

Chromosome: chr11

Position: 20906615
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1407 98.93% 1.07%
All Indica799 100.00% 0.00%
All Japonica487 96.92% 3.08%
Aus65 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica326 98.77% 1.23%
Tropical Japonica94 94.68% 5.32%
Japonica Intermediate67 91.04% 8.96%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1120906615 C->T INTERGENIC None