Detailed information of SNP:
|
SNP ID:
sf1121095161(Gbrowse)
Chromosome: chr11 Position: 21095161 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1375 | 54.33% | 45.67% |
| All Indica | 766 | 83.42% | 16.58% |
| All Japonica | 491 | 7.33% | 92.67% |
| Aus | 64 | 79.69% | 20.31% |
| Indica I | 367 | 83.92% | 16.08% |
| Indica II | 199 | 86.43% | 13.57% |
| Indica Intermediate | 200 | 79.50% | 20.50% |
| Temperate Japonica | 332 | 6.63% | 93.37% |
| Tropical Japonica | 91 | 9.89% | 90.11% |
| Japonica Intermediate | 68 | 7.35% | 92.65% |
| Group VI/Aromatic | 13 | 46.15% | 53.85% |
| Intermediate | 41 | 36.59% | 63.41% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1121095161 | A->G | INTERGENIC | None |