Detailed information of SNP:
SNP ID:
sf1121382404(Gbrowse)
Chromosome: chr11 Position: 21382404 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1411 | 98.02% | 1.98% |
All Indica | 794 | 96.73% | 3.27% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 372 | 97.31% | 2.69% |
Indica II | 212 | 96.23% | 3.77% |
Indica Intermediate | 210 | 96.19% | 3.81% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 11 | 90.91% | 9.09% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1121382404 | G->A | INTERGENIC | None |