Detailed information of SNP:



SNP ID: sf1121946934(Gbrowse)

Chromosome: chr11

Position: 21946934
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1413 98.73% 1.27%
All Indica798 100.00% 0.00%
All Japonica493 96.55% 3.45%
Aus66 100.00% 0.00%
Indica I374 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica332 96.99% 3.01%
Tropical Japonica93 93.55% 6.45%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1121946934 A->T INTERGENIC None