Detailed information of SNP:



SNP ID: sf1121950840(Gbrowse)

Chromosome: chr11

Position: 21950840
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1418 96.61% 3.39%
All Indica799 99.62% 0.38%
All Japonica496 91.53% 8.47%
Aus67 100.00% 0.00%
Indica I375 99.47% 0.53%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 96.72% 3.28%
Tropical Japonica94 82.98% 17.02%
Japonica Intermediate67 77.61% 22.39%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1121950840 C->A INTERGENIC None