Detailed information of SNP:



SNP ID: sf1122054712(Gbrowse)

Chromosome: chr11

Position: 22054712
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1407 95.17% 4.83%
All Indica787 92.38% 7.62%
All Japonica497 99.40% 0.60%
Aus67 95.52% 4.48%
Indica I375 99.73% 0.27%
Indica II203 75.37% 24.63%
Indica Intermediate209 95.69% 4.31%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1122054712 C->T INTERGENIC None