Detailed information of SNP:



SNP ID: sf1122756407(Gbrowse)

Chromosome: chr11

Position: 22756407
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 95.56% 4.44%
All Indica799 99.25% 0.75%
All Japonica497 93.36% 6.64%
Aus67 67.16% 32.84%
Indica I375 99.20% 0.80%
Indica II213 99.06% 0.94%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 90.15% 9.85%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1122756407 G->A INTERGENIC None