Detailed information of SNP:
|
SNP ID:
sf1123808751(Gbrowse)
Chromosome: chr11 Position: 23808751 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1385 | 99.06% | 0.94% |
| All Indica | 797 | 100.00% | 0.00% |
| All Japonica | 468 | 97.22% | 2.78% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 211 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 330 | 100.00% | 0.00% |
| Tropical Japonica | 75 | 84.00% | 16.00% |
| Japonica Intermediate | 63 | 98.41% | 1.59% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1123808751 | G->A | INTERGENIC | None |