Detailed information of SNP:



SNP ID: sf1124040326(Gbrowse)

Chromosome: chr11

Position: 24040326
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 95.63% 4.37%
All Indica799 100.00% 0.00%
All Japonica496 88.10% 11.90%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 89.22% 10.78%
Tropical Japonica94 84.04% 15.96%
Japonica Intermediate68 88.24% 11.76%
Group VI/Aromatic14 78.57% 21.43%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1124040326 C->T INTERGENIC None