Detailed information of SNP:
|
SNP ID:
sf1124126182(Gbrowse)
Chromosome: chr11 Position: 24126182 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1380 | 95.36% | 4.64% |
| All Indica | 785 | 94.65% | 5.35% |
| All Japonica | 473 | 97.46% | 2.54% |
| Aus | 66 | 87.88% | 12.12% |
| Indica I | 371 | 94.61% | 5.39% |
| Indica II | 203 | 92.12% | 7.88% |
| Indica Intermediate | 211 | 97.16% | 2.84% |
| Temperate Japonica | 314 | 97.77% | 2.23% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 66 | 95.45% | 4.55% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1124126182 | G->A | INTERGENIC | None |