Detailed information of SNP:
|
SNP ID:
sf1124634021(Gbrowse)
Chromosome: chr11 Position: 24634021 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1318 | 91.65% | 8.35% |
| All Indica | 797 | 99.25% | 0.75% |
| All Japonica | 401 | 74.56% | 25.44% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 212 | 98.58% | 1.42% |
| Indica Intermediate | 210 | 99.05% | 0.95% |
| Temperate Japonica | 260 | 62.69% | 37.31% |
| Tropical Japonica | 81 | 97.53% | 2.47% |
| Japonica Intermediate | 60 | 95.00% | 5.00% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1124634021 | A->G | INTERGENIC | None |