Detailed information of SNP:
|
SNP ID:
sf1124761769(Gbrowse)
Chromosome: chr11 Position: 24761769 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 85.46% | 14.54% |
| All Indica | 797 | 76.66% | 23.34% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 91.04% | 8.96% |
| Indica I | 374 | 63.64% | 36.36% |
| Indica II | 213 | 83.57% | 16.43% |
| Indica Intermediate | 210 | 92.86% | 7.14% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 71.43% | 28.57% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1124761769 | G->A | INTERGENIC | None |